Amino-modified Nucleosides
3'-Azido-2',3'-dideoxy-5-hydroxyuridine
Quick view. We supply 3'-Azido-2',3'-dideoxy-5-hydroxyuridine as a specialty product for nucleic acid chemistry and oligonucleotide research workflows. CAS 111495-90-0. Catalog target purity: Specification on request.
Product profile
3'-Azido-2',3'-dideoxy-5-hydroxyuridine is classified as nucleoside or protected nucleoside intermediate (Formula C9H11N5O5; molecular weight 269.22).
3'-Azido-2',3'-dideoxy-5-hydroxyuridine can serve as a starting material, protected intermediate or analytical comparator in nucleoside and nucleotide route development.
For 3'-Azido-2',3'-dideoxy-5-hydroxyuridine, dye-labeled nucleotides or amidites are bulkier than native monomers; incorporation efficiency, label density, photobleaching and light exposure should be controlled.
Names and search terms
Confirmed or normalized name variants
- Uridine,3'-azido-2',3'-dideoxy-5-hydroxy-
- 3’-Azido-2’,3’-dideoxy-5-hydroxyuridine, antiviral agent
Useful catalog search terms
- CAS 111495-90-0
- Nucleoside or protected nucleoside intermediate
- azide click handle
- amine functionality
- fluorescent label
- Amino-modified Nucleosides
Physicochemical data
| Key chemistry motifs | azide click handle; amine functionality; fluorescent label |
|---|---|
| InChI | InChI=1S/C9H11N5O5/c10-13-12-4-1-7(19-6(4)3-15)14-2-5(16)8(17)11-9(14)18/h,4,6-7,15-16H,1,3H2,(H,11,17,18)/t4-,6+,7+/m0/s |
| InChIKey | AXXNSKSOBHVEGQ-UBKIQSJTSA-N |
| SMILES | C1[C@@H]([C@H](O[C@H]1N2C=C(C(=O)NC2=O)O)CO)N=[N+]=[N-] |
Release documentation
The current specification defines the analytical method and acceptance criteria; the released lot result is reported on the CoA.
Additional HPLC, MS or NMR documentation can be agreed during technical review where available.
Additional application examples
- Typical work includes protection/deprotection studies, phosphorylation or phosphitylation route scouting and impurity identification.
- The material can support medicinal-chemistry analog preparation and process-development feasibility studies.
Product-specific evaluation notes
Potential advantages
- Fluorescent labels enable non-radioactive detection and can reduce downstream staining or secondary-label steps.
- Click-compatible handles separate oligonucleotide synthesis from late-stage labeling, which helps screen multiple payloads from a common intermediate.
- Reactive handles make the product adaptable across dye-labeling, surface-coupling and ligand-conjugation workflows.
- Dideoxy analogs provide clear extension-stop behavior when accepted by a polymerase.
Method limitations
- Dye-labeled nucleotides or amidites are bulkier than native monomers; incorporation efficiency, label density, photobleaching and light exposure should be controlled.
- Copper-catalyzed, copper-free or inverse-electron-demand click conditions can affect sensitive oligonucleotides differently; residual metal, solvent and purification strategy should be controlled.
- Functional handles may require orthogonal protection, pH control and rapid purification to avoid hydrolysis, oxidation or cross-reaction.
- Polymerase acceptance varies; absence of a 3′-OH prevents further extension after incorporation.
These points describe 3'-Azido-2',3'-dideoxy-5-hydroxyuridine or its named chemical feature. Broader product-family guidance is maintained on the category page.
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Frequently asked questions
Can the package size for 3'-Azido-2',3'-dideoxy-5-hydroxyuridine be customized?
Yes. Share the initial quantity, expected future scale, delivery timeline and packaging preference for review.
What information should be included in a quote request?
Quote catalog number BX-AMN-0136 and CAS 111495-90-0, the intended research workflow, required quantity and any additional HPLC, MS or NMR documentation needed.
Product-relevant literature
The publications below discuss 3'-Azido-2',3'-dideoxy-5-hydroxyuridine or the named structural feature represented by this product.
