Intermediates
5-(3-Hydroxypropyl)uracil
Quick view. We supply 5-(3-Hydroxypropyl)uracil as a specialty product for nucleic acid chemistry and oligonucleotide research workflows. CAS 53761-38-9. Catalog target purity: Specification on request.
Product profile
5-(3-Hydroxypropyl)uracil is classified as specialty research-use chemical building block (Formula C7H10N2O3; molecular weight 170.17).
5-(3-Hydroxypropyl)uracil can be used as a defined research input for chemistry feasibility, analytical method development and material comparison.
For 5-(3-Hydroxypropyl)uracil, dye-labeled nucleotides or amidites are bulkier than native monomers; incorporation efficiency, label density, photobleaching and light exposure should be controlled.
Names and search terms
Confirmed or normalized name variants
- 5-(3-Hydroxypropyl)pyrimidine-2,4(1H,3H)-dione
- 5-(3-Hydroxypropyl)-1H-pyrimidine-2,4-dione
- 5-(3-Hydroxypropyl)-2,4(1H,3H)-pyriMidinedione
- 2,4(1H,3H)-Pyrimidinedione, 5-(3-hydroxypropyl)-
- 5-(3-Hydroxypropyl)uracil,5-(3-Hydroxypropyl)-2,4(1H,3H)-pyrimidinedione
Useful catalog search terms
- CAS 53761-38-9
- Specialty research-use chemical building block
- fluorescent label
- Intermediates
Physicochemical data
| Key chemistry motifs | fluorescent label |
|---|---|
| InChI | InChI=1S/C7H10N2O3/c10-3-1-2-5-4-8-7(12)9-6(5)11/h4,10H,1-3H2,(H2,8,9,11,12) |
| InChIKey | SQMSSZQFSKGEMH-UHFFFAOYSA-N |
| SMILES | C1=C(C(=O)NC(=O)N1)CCCO |
| Density | 1.266±0.06 g/cm3(Predicted) |
| pKa | 9.05±0.10(Predicted) |
Release documentation
The current specification defines the analytical method and acceptance criteria; the released lot result is reported on the CoA.
Additional HPLC, MS or NMR documentation can be agreed during technical review where available.
Additional application examples
- Typical qualification includes identity, purity method, storage, handling and downstream workflow compatibility.
- Related analogs, impurity standards and custom quantities can be reviewed for project-specific research needs.
Product-specific evaluation notes
Potential advantages
- Fluorescent labels enable non-radioactive detection and can reduce downstream staining or secondary-label steps.
Method limitations
- Dye-labeled nucleotides or amidites are bulkier than native monomers; incorporation efficiency, label density, photobleaching and light exposure should be controlled.
These points describe 5-(3-Hydroxypropyl)uracil or its named chemical feature. Broader product-family guidance is maintained on the category page.
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Frequently asked questions
Can the package size for 5-(3-Hydroxypropyl)uracil be customized?
Yes. Share the initial quantity, expected future scale, delivery timeline and packaging preference for review.
What information should be included in a quote request?
Quote catalog number BX-INTE-0080 and CAS 53761-38-9, the intended research workflow, required quantity and any additional HPLC, MS or NMR documentation needed.
Product-relevant literature
The publications below discuss 5-(3-Hydroxypropyl)uracil or the named structural feature represented by this product.